1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
open Core
open Async
include Delimited_kernel.Read
open Deferred.Let_syntax
let buffer_size = 10 * 65 * 1024
module Streaming = struct
include Delimited_kernel.Read.Streaming
let input_reader t r =
let buffer = Bytes.create buffer_size in
Deferred.repeat_until_finished t (fun t ->
match%map Reader.read r buffer ~len:buffer_size with
| `Eof -> `Finished t
| `Ok len ->
let t = Streaming.input t buffer ~len in
`Repeat t)
;;
let read_file
?strip
?sep
?quote
?start_line_number
?on_invalid_row
?
builder
~init
~f
~filename
=
let t =
create
?strip
?sep
?quote
?start_line_number
?on_invalid_row
?header
builder
~init
~f
in
let%map t = Reader.with_file filename ~f:(input_reader t) in
let t = finish t in
t
;;
end
let fold_reader_internal
?strip
?(skip_lines = 0)
?sep
?quote
?
?on_invalid_row
builder
~init
~f
~what_to_enqueue
r
=
let%bind () = Shared.drop_lines r skip_lines in
let buffer = Bytes.create buffer_size in
let queue = Queue.create () in
let state =
Streaming.create_indexed
?strip
?sep
?quote
~start_line_number:(skip_lines + 1)
?header
?on_invalid_row
builder
~init:()
~f:(fun line_number () elt ->
Queue.enqueue queue (what_to_enqueue elt ~line_number))
in
Deferred.repeat_until_finished (state, init) (fun (state, acc) ->
match%bind Reader.read r buffer ~len:buffer_size with
| `Eof ->
let (_ : unit Streaming.t) = Streaming.finish state in
let%bind acc = if Queue.is_empty queue then return acc else f acc queue in
Queue.clear queue;
let%map () = Reader.close r in
`Finished acc
| `Ok len ->
let state = Streaming.input state buffer ~len in
let%map acc = if Queue.is_empty queue then return acc else f acc queue in
Queue.clear queue;
`Repeat (state, acc))
;;
let fold_readeri'
?strip
?skip_lines
?sep
?quote
?
?on_invalid_row
builder
~init
~f
r
=
fold_reader_internal
?strip
?skip_lines
?sep
?quote
?header
?on_invalid_row
builder
~init
~f
~what_to_enqueue:(fun line ~line_number -> line_number, line)
r
;;
let fold_reader' ?strip ?skip_lines ?sep ?quote ? ?on_invalid_row builder ~init ~f r
=
fold_reader_internal
?strip
?skip_lines
?sep
?quote
?header
?on_invalid_row
builder
~init
~f
~what_to_enqueue:(fun line ~line_number:_ -> line)
r
;;
let fold_queue acc queue ~f =
Queue.fold queue ~init:(return acc) ~f:(fun deferred_acc elt ->
let bind_without_unnecessary_yielding x ~f =
match Deferred.peek x with
| Some x -> f x
| None -> Deferred.bind x ~f
in
bind_without_unnecessary_yielding deferred_acc ~f:(fun acc -> f acc elt))
;;
let fold_readeri ?strip ?skip_lines ?sep ?quote ? ?on_invalid_row builder ~init ~f r
=
fold_readeri'
?strip
?skip_lines
?sep
?quote
?header
?on_invalid_row
builder
~init
r
~f:(fold_queue ~f:(fun acc (line_number, elt) -> f line_number acc elt))
;;
let fold_reader ?strip ?skip_lines ?sep ?quote ? ?on_invalid_row builder ~init ~f r =
fold_reader'
?strip
?skip_lines
?sep
?quote
?header
?on_invalid_row
builder
~init
r
~f:(fold_queue ~f)
;;
let fold_reader_without_pushback
?strip
?skip_lines
?sep
?quote
?
?on_invalid_row
builder
~init
~f
r
=
fold_reader'
?strip
?skip_lines
?sep
?quote
?header
?on_invalid_row
builder
~init
r
~f:(fun acc queue -> return (Queue.fold queue ~init:acc ~f))
;;
let fold_reader_without_pushbacki
?strip
?skip_lines
?sep
?quote
?
?on_invalid_row
builder
~init
~f
r
=
fold_readeri'
?strip
?skip_lines
?sep
?quote
?header
?on_invalid_row
builder
~init
r
~f:(fun acc queue ->
return
(Queue.fold queue ~init:acc ~f:(fun acc (line_number, elt) -> f line_number acc elt)))
;;
let pipe_of_reader ?strip ?skip_lines ?sep ?quote ? ?on_invalid_row builder reader =
let r, w = Pipe.create () in
let write_to_pipe : unit Deferred.t =
let%bind () =
fold_reader'
?strip
?skip_lines
?sep
?quote
?header
?on_invalid_row
builder
~init:()
reader
~f:(fun () queue ->
if Pipe.is_closed w
then (
let%bind () = Reader.close reader in
Deferred.never ())
else Pipe.transfer_in w ~from:queue)
in
return (Pipe.close w)
in
don't_wait_for write_to_pipe;
r
;;
let create_reader ?strip ?skip_lines ?sep ?quote ? ?on_invalid_row builder filename =
let%bind reader = Reader.open_file filename in
Monitor.handle_errors
(fun () ->
return
(pipe_of_reader
?strip
?skip_lines
?sep
?quote
?header
?on_invalid_row
builder
reader))
(fun exn ->
don't_wait_for (Reader.close reader);
raise (Monitor.extract_exn exn))
;;
let load_lines ?strip ?skip_lines ?sep ?quote ? ?on_invalid_row builder filename =
create_reader ?strip ?skip_lines ?sep ?quote ?header ?on_invalid_row builder filename
>>= Pipe.to_list
;;
let rec do_line_skip
~newlines_between_reads
~skip_lines
~skipped_so_far
~stream
~input_pipe
=
if skipped_so_far >= skip_lines
then return stream
else (
match%bind Pipe.read input_pipe with
| `Eof ->
raise_s
[%message
"Delimited.Read.pipe_of_chunks: Reached EOF while skipping lines"
(skip_lines : int)
(skipped_so_far : int)]
| `Ok input ->
let rec skip_lines_in_chunk ~pos ~skipped_so_far =
match String.index_from input pos '\n' with
| None ->
let skipped_so_far = skipped_so_far + if newlines_between_reads then 1 else 0 in
do_line_skip
~newlines_between_reads
~skip_lines
~skipped_so_far
~stream
~input_pipe
| Some end_pos ->
let skipped_so_far = skipped_so_far + 1 in
if skipped_so_far >= skip_lines
then (
let stream = Streaming.input_string stream ~pos:(end_pos + 1) input in
return stream)
else skip_lines_in_chunk ~pos:(end_pos + 1) ~skipped_so_far
in
skip_lines_in_chunk ~pos:0 ~skipped_so_far)
;;
let parse_pipe
~newlines_between_reads
?strip
?(start_line_number = 1)
?(skip_lines = 0)
?sep
?quote
?
?on_invalid_row
builder
input_pipe
=
Pipe.create_reader ~close_on_exception:false (fun writer ->
let init =
Streaming.create
?header
?strip
?sep
?quote
~start_line_number:(start_line_number + skip_lines)
?on_invalid_row
builder
~init:(return ())
~f:(fun _ row ->
Pipe.write writer row)
in
let%bind init =
do_line_skip
~newlines_between_reads
~skip_lines
~skipped_so_far:0
~stream:init
~input_pipe
in
let%bind stream =
Pipe.fold input_pipe ~init ~f:(fun stream input ->
let stream = Streaming.input_string stream input in
let stream =
if newlines_between_reads then Streaming.input_string stream "\n" else stream
in
let%map () = Streaming.acc stream in
stream)
in
let stream = Streaming.finish stream in
Streaming.acc stream)
;;
let pipe_of_chunks
?strip
?start_line_number
?skip_lines
?sep
?quote
?
?on_invalid_row
builder
input_pipe
=
parse_pipe
~newlines_between_reads:false
?strip
?start_line_number
?skip_lines
?sep
?quote
?header
?on_invalid_row
builder
input_pipe
;;
let pipe_of_lines
?strip
?start_line_number
?skip_lines
?sep
?quote
?
?on_invalid_row
builder
input_pipe
=
parse_pipe
~newlines_between_reads:true
?strip
?start_line_number
?skip_lines
?sep
?quote
?header
?on_invalid_row
builder
input_pipe
;;