Bowtie (p.bistro.0.5.0.doc.bistro.bioinfo.Bistro

class type index = object ... end

val bowtie_build : 
  ?packed:bool ->
  ?color:bool ->
  fasta Bistro.pworkflow ->
  index Bistro.pworkflow

val bowtie : 
  ?l:int ->
  ?e:int ->
  ?m:int ->
  ?fastq_format:'a Fastq.format ->
  ?n:int ->
  ?v:int ->
  ?maxins:int ->
  index Bistro.pworkflow ->
  [ `single_end of 'a Bistro.pworkflow list
  | `paired_end of 'a Bistro.pworkflow list * 'a Bistro.pworkflow list ] ->
  sam Bistro.pworkflow