Module Bistro_bioinfo.Fastq_screen
class type output = object ... endval fastq_screen :
?bowtie2_opts:string ->
?filter:
[ `Not_map
| `Uniquely
| `Multi_maps
| `Maps
| `Not_map_or_Uniquely
| `Not_map_or_Multi_maps
| `Ignore ]
list ->
?illumina:bool ->
?nohits:bool ->
?pass:int ->
?subset:int ->
?tag:bool ->
?threads:int ->
?top:[ `top1 of int | `top2 of int * int ] ->
?lightweight:bool ->
fastq Bistro.pworkflow ->
(string * fasta Bistro.pworkflow) list ->
output Bistro.pworkflow