Subread (p.bistro.0.5.0.doc.bistro.bioinfo.Bistro

class type count_table = object ... end

val featureCounts : 
  ?feature_type:string ->
  ?attribute_type:string ->
  ?strandness:[ `Unstranded | `Stranded | `Reversely_stranded ] ->
  ?q:int ->
  ?nthreads:int ->
  gff Bistro.pworkflow ->
  < format : [< `bam | `sam ].. > Bistro.pworkflow ->
  [ `featureCounts ] Bistro.dworkflow

val featureCounts_tsv : 
  [ `featureCounts ] Bistro.dworkflow ->
  count_table Bistro.pworkflow

val featureCounts_htseq_tsv : 
  [ `featureCounts ] Bistro.dworkflow ->
  Htseq.count_tsv Bistro.pworkflow

val featureCounts_summary : 
  [ `featureCounts ] Bistro.dworkflow ->
  Bistro.text_file Bistro.pworkflow